/*
 * Shared look of the saezlab MkDocs Material sites.
 *
 * Load a palette file first (palette-sysbioverse.css or
 * palette-omnipath.css), then this file. Do not edit the copy in a
 * package repository: change the original in saezverse
 * (guidelines/docs-theme/) and copy it again.
 */

/* ---- Colors: map the palette onto Material ---------------------- */

:root,
[data-md-color-scheme="default"],
[data-md-color-scheme="slate"] {
  --md-primary-fg-color: var(--sv-main);
  --md-primary-fg-color--light: var(--sv-main);
  --md-primary-fg-color--dark: var(--sv-link);
  --md-primary-bg-color: #FFFFFF;
  --md-accent-fg-color: var(--sv-link-hover);
  --md-accent-fg-color--transparent: color-mix(in srgb, var(--sv-accent) 10%, transparent);
  --md-typeset-a-color: var(--sv-link);

  /* Box colors (RWTH palette) */
  --sv-blue: #176FC1;
  --sv-green: #4CBD38;
  --sv-violet: #7264B9;
  --sv-purple: #5B205F;
  --sv-orange: #F89D0E;
  --sv-red: #D22027;
  --sv-grey: #918F90;
}

/* ---- Page width --------------------------------------------------- */

/*
 * Wider than Material's 61rem, so code, tables and notebook output have
 * room. Running text keeps its own line-length limit (below).
 */
.md-grid {
  max-width: 82rem;
}

@media screen and (min-width: 1220px) {
  .md-grid {
    max-width: 90rem;
  }

  .md-sidebar--primary .md-sidebar__scrollwrap {
    box-sizing: border-box;
    padding-left: clamp(0.75rem, 1.25vw, 1.4rem);
  }

  .md-sidebar--secondary .md-sidebar__scrollwrap {
    box-sizing: border-box;
    padding-right: clamp(0.75rem, 1.25vw, 1.4rem);
  }
}

/* ---- Text size and line length ------------------------------------ */

/*
 * Material sets body text to 16px. We use 18px, and limit running text
 * to about 60-70 characters per line. Code blocks, tables, figures and
 * notebook cells keep the full width of the content column.
 */
.md-typeset {
  font-size: 0.95rem;
  line-height: 1.6;
  --sv-measure: 32em;
}

/* Wide screens: a bit larger text (Material scales rem from 1600px too) */
@media screen and (min-width: 100em) {
  .md-typeset {
    font-size: 1rem;
  }
}

.md-typeset > p,
.md-typeset > ul,
.md-typeset > ol,
.md-typeset > dl,
.md-typeset > blockquote,
.md-typeset > h1,
.md-typeset > h2,
.md-typeset > h3,
.md-typeset > h4,
.md-typeset > h5,
.md-typeset > h6,
.md-typeset > .admonition,
.md-typeset > details {
  max-width: var(--sv-measure);
}

/* The same limit for the text cells of notebooks (mkdocs-jupyter) */
.md-typeset .jp-MarkdownOutput > p,
.md-typeset .jp-MarkdownOutput > ul,
.md-typeset .jp-MarkdownOutput > ol,
.md-typeset .jp-MarkdownOutput > blockquote,
.md-typeset .jp-MarkdownOutput > h1,
.md-typeset .jp-MarkdownOutput > h2,
.md-typeset .jp-MarkdownOutput > h3,
.md-typeset .jp-MarkdownOutput > h4 {
  max-width: var(--sv-measure);
}

/*
 * When the content column is only a little wider than the line-length
 * limit, the limit looks like a formatting error: use the full width.
 * The query container is the content column.
 */
.md-content {
  container-type: inline-size;
}

@container (max-width: 42rem) {
  .md-typeset {
    --sv-measure: none;
  }
}

/*
 * Tables: one step below body text on the type scale (Material uses
 * 0.64rem, too small next to 19px text). Also for data frames in
 * notebooks.
 */
.md-typeset table:not([class]),
.md-typeset .jupyter-wrapper table.dataframe {
  font-size: 0.76rem;
}

@media screen and (min-width: 100em) {
  .md-typeset table:not([class]),
  .md-typeset .jupyter-wrapper table.dataframe {
    font-size: 0.8rem;
  }
}

/* A paragraph with only an image is a figure: keep the full width */
.md-typeset > p:has(> img:only-child),
.md-typeset > p:has(> a:only-child > img:only-child) {
  max-width: none;
}

.md-typeset code,
.md-typeset kbd,
.md-typeset pre {
  font-size: 0.85em;
}

/* ---- Header: no logo, site name links to the home page ------------ */

.md-header__button.md-logo,
.md-nav__button.md-logo {
  display: none;
}

/* The title starts at the same left edge as the navigation tabs */
[dir] .md-header__title {
  margin-left: 0.6rem;
  font-size: 1.1rem;
  font-weight: 700;
}

.md-header__site-link,
.md-header__site-link:hover {
  color: inherit;
}

.md-header__site-link:hover {
  text-decoration: underline;
  text-decoration-thickness: 1px;
  text-underline-offset: 0.2em;
}

/*
 * Navigation tabs are in the header (overrides/partials/header.html),
 * right of the title, so they stay visible on scroll. Material's own tab
 * bar under the header is not used. Narrow screens use the drawer, as in
 * Material.
 */
.md-tabs {
  display: none;
}

.sv-header-tabs {
  flex: none;
  align-self: stretch;
  display: none;
}

@media screen and (min-width: 76.25em) {
  .sv-header-tabs {
    display: block;
  }

  /* The site name never gives up its space to the tabs */
  [dir] .md-header__title {
    flex: 1 0 auto;
  }

  .md-header__title .md-header__ellipsis {
    position: relative;
  }
}

/*
 * Until 1600px the tabs leave less room: a narrower search field and
 * only the icon of the repository link.
 */
@media screen and (min-width: 76.25em) and (max-width: 99.99em) {
  .md-search__inner {
    width: 8rem;
  }

  [data-md-toggle="search"]:checked ~ .md-header .md-search__inner {
    width: 23.4rem;
  }

  .md-header__source {
    width: auto;
    margin-left: 0.6rem;
  }

  .md-header__source .md-source__repository {
    display: none;
  }

  .md-header__source .md-source__icon {
    margin-right: 0;
  }
}

.sv-header-tabs .md-tabs__list {
  margin: 0 0.4rem 0 0;
}

.sv-header-tabs .md-tabs__item {
  padding-left: 0.5rem;
  padding-right: 0.5rem;
}

.sv-header-tabs .md-tabs__link {
  margin-top: 0.75rem;
  color: inherit;
}

/* Navigation tabs: bold, full white; the active tab is underlined */
.md-tabs__link {
  font-size: 0.8rem;
  font-weight: 700;
  opacity: 1;
}

.md-tabs__item--active .md-tabs__link {
  text-decoration: underline;
  text-decoration-thickness: 2px;
  text-underline-offset: 0.35em;
}

.md-tabs__link:hover {
  opacity: 1;
  text-decoration: underline;
  text-decoration-thickness: 2px;
  text-underline-offset: 0.35em;
}

/* ---- Side navigation and table of contents ------------------------ */

/* Every item is a link, so an underline adds nothing */
.md-nav__link,
.md-nav__link:hover {
  text-decoration: none;
}

/*
 * Hide the left navigation when it would list only the current page
 * (a top-level page with no sub-pages, e.g. Home or Installation).
 * Only on wide screens: on narrow screens the same element is the
 * navigation drawer.
 */
@media screen and (min-width: 76.25em) {
  .md-sidebar--primary:has(.md-nav--primary > .md-nav__list > .md-nav__item--active:not(.md-nav__item--nested)) {
    visibility: hidden;
  }
}

/* Buttons are links that need no underline */
.md-typeset a.md-button,
.md-typeset a.md-button:hover {
  text-decoration: none;
}

/* ---- Square corners everywhere ------------------------------------ */

.md-typeset .admonition,
.md-typeset details,
.md-typeset pre > code,
.md-typeset code,
.md-typeset kbd,
.md-typeset .md-button,
.md-typeset .tabbed-set,
.md-typeset table:not([class]),
.md-typeset .grid.cards > ul > li,
.md-typeset .grid > .card,
.md-typeset img,
.md-clipboard,
.md-search__form,
.md-source__fact,
.md-top {
  border-radius: 0;
}

/* ---- Labels: solid, saturated background ------------------------- */

.md-typeset .sv-label {
  display: inline-block;
  padding: 0.1em 0.5em;
  font-size: 0.75em;
  font-weight: 700;
  letter-spacing: 0.04em;
  text-transform: uppercase;
  text-decoration: none;
  color: #FFFFFF;
  background-color: var(--sv-main);
  border: none;
  border-radius: 0;
}

.md-typeset .sv-label--accent {
  color: var(--sv-accent-fg);
  background-color: var(--sv-accent);
}

.md-typeset .md-button {
  border-width: 1px;
  box-shadow: none;
}

.md-typeset .md-button--primary {
  color: #FFFFFF;
  background-color: var(--sv-main);
  border-color: var(--sv-main);
}

.md-typeset .md-button:focus,
.md-typeset .md-button:hover {
  color: var(--sv-accent-fg);
  background-color: var(--sv-accent);
  border-color: var(--sv-accent);
}

/* ---- Boxes -------------------------------------------------------- */

/*
 * Two box styles:
 *
 * - admonitions and .sv-box: 1px border with a 5px rule on the left
 *   and a light tint of the same color (as in the Arch Wiki);
 * - .sv-panel: light tone background, no border.
 *
 * The doubled .md-typeset outranks the per-type colors of Material.
 */
.md-typeset.md-typeset .admonition,
.md-typeset.md-typeset details,
.md-typeset.md-typeset .sv-box {
  --sv-box: var(--sv-main);
  border: 1px solid var(--sv-box);
  border-left-width: 5px;
  border-radius: 0;
  box-shadow: none;
  background-color: color-mix(in srgb, var(--sv-box) 6%, var(--md-default-bg-color));
  font-size: 0.9em;
}

.md-typeset.md-typeset .sv-box {
  padding: 0.6em 1em;
  margin: 1.25em 0;
}

.md-typeset.md-typeset .admonition > .admonition-title,
.md-typeset.md-typeset details > summary {
  background-color: transparent;
  color: var(--sv-box);
  font-weight: 700;
}

.md-typeset.md-typeset .admonition > .admonition-title::before,
.md-typeset.md-typeset details > summary::before {
  background-color: var(--sv-box);
}

.md-typeset.md-typeset .admonition:focus-within,
.md-typeset.md-typeset details:focus-within {
  box-shadow: none;
}

.md-typeset.md-typeset .sv-panel {
  padding: 1em 1.25em;
  margin: 1.25em 0;
  border: none;
  border-radius: 0;
  background-color: var(--sv-main-light);
}

/* Admonition types: one color each */
.md-typeset.md-typeset :is(.admonition, details):is(.abstract, .summary, .tldr, .info, .todo) {
  --sv-box: var(--sv-blue);
}

.md-typeset.md-typeset :is(.admonition, details):is(.tip, .hint, .important, .success, .check, .done) {
  --sv-box: var(--sv-green);
}

.md-typeset.md-typeset :is(.admonition, details):is(.question, .help, .faq) {
  --sv-box: var(--sv-violet);
}

.md-typeset.md-typeset :is(.admonition, details):is(.warning, .caution, .attention) {
  --sv-box: var(--sv-orange);
}

.md-typeset.md-typeset :is(.admonition, details):is(.failure, .fail, .missing, .danger, .error, .bug) {
  --sv-box: var(--sv-red);
}

.md-typeset.md-typeset :is(.admonition, details).example {
  --sv-box: var(--sv-purple);
}

.md-typeset.md-typeset :is(.admonition, details):is(.quote, .cite) {
  --sv-box: var(--sv-grey);
}

/* Content tabs and cards follow the same rules */
.md-typeset .tabbed-labels > label:hover {
  color: var(--sv-link-hover);
}

.md-typeset .grid.cards > ul > li,
.md-typeset .grid > .card {
  border: 1px solid var(--md-default-fg-color--lightest);
  box-shadow: none;
}

.md-typeset .grid.cards > ul > li:hover,
.md-typeset .grid > .card:hover {
  border-color: var(--sv-main);
  box-shadow: none;
}

/* ---- Landing page box -------------------------------------------- */

/*
 * The opening box of a package's home page: logo, label, package name
 * and one intro paragraph. Light tone, no border. Markup:
 *
 * <div class="sv-hero"><div class="sv-hero-grid">
 *   <img class="sv-hero-logo" src="assets/logo.png" alt="...">
 *   <div class="sv-hero-text">
 *     <div class="sv-kicker">...</div>
 *     <h1>package</h1>
 *     <p class="sv-lead">...</p>
 *   </div>
 * </div></div>
 *
 * Three layouts, by the width of the box:
 *
 * - wide: the logo on the left, all text on the right;
 * - medium (the label would wrap): the logo left of the label and the
 *   name, the paragraph below at full width;
 * - narrow: everything in one column, the logo on top.
 *
 * .sv-hero-text has display: contents, so its children are items of
 * the grid.
 */
.md-typeset .sv-hero {
  padding: 2rem;
  margin: 0 0 1.5rem;
  background: var(--sv-main-light);
}

.md-typeset .sv-hero-grid {
  display: grid;
  grid-template-columns: minmax(6rem, 10rem) 1fr;
  grid-template-rows: 1fr auto auto auto 1fr;
  grid-template-areas:
    "logo ."
    "logo kicker"
    "logo title"
    "logo lead"
    "logo .";
  column-gap: 2rem;
}

.md-typeset .sv-hero-text {
  display: contents;
}

.md-typeset .sv-hero-logo {
  grid-area: logo;
  align-self: center;
  width: 100%;
  height: auto;
}

.md-typeset .sv-hero .sv-kicker {
  grid-area: kicker;
  justify-self: start;
}

.md-typeset .sv-hero h1 {
  grid-area: title;
  margin: 0 0 0.3em;
}

.md-typeset .sv-hero .sv-lead {
  grid-area: lead;
}

/*
 * The breakpoints are on the window, not on the box: the box gets wider
 * when a sidebar collapses, so a rule on its width would switch back and
 * forth. They are set so that a label of up to about 45 characters stays
 * on one line in the wide and the medium layout.
 */
@media screen and (max-width: 87.49em) {
  .md-typeset .sv-hero {
    padding: 1.4rem;
  }

  .md-typeset .sv-hero-grid {
    grid-template-columns: 4.5rem 1fr;
    grid-template-rows: 1fr auto auto 1fr auto;
    grid-template-areas:
      "logo ."
      "logo kicker"
      "logo title"
      "logo ."
      "lead lead";
    column-gap: 1rem;
  }

  .md-typeset .sv-hero .sv-kicker {
    margin-bottom: 0.6rem;
  }

  .md-typeset .sv-hero h1 {
    margin: 0;
  }

  .md-typeset .sv-hero .sv-lead {
    margin-top: 1.2rem;
  }
}

@media screen and (max-width: 43.74em) {
  .md-typeset .sv-hero-grid {
    grid-template-columns: 1fr;
    grid-template-rows: auto;
    grid-template-areas:
      "logo"
      "kicker"
      "title"
      "lead";
  }

  .md-typeset .sv-hero-logo {
    width: 8rem;
    margin-bottom: 1.2rem;
  }
}

/* Logos are drawn for a light background: in dark mode they sit on a light tile */
[data-md-color-scheme="slate"] .md-typeset .sv-hero-logo {
  background: #E6F7F4;
  padding: 0.6rem;
  box-sizing: border-box;
}

.md-typeset .sv-kicker {
  display: inline-block;
  padding: 0.2rem 0.6rem;
  margin-bottom: 1rem;
  background: var(--sv-main);
  color: #FFFFFF;
  font-size: 0.72rem;
  font-weight: 700;
  letter-spacing: 0.08em;
  text-transform: uppercase;
}

.md-typeset .sv-lead {
  font-size: 1.05rem;
  line-height: 1.6;
  margin: 0;
}

/* ---- Part of sysbioverse ------------------------------------------- */

/*
 * The last block of a package's home page: the sysbioverse logo and one
 * sentence on the ecosystem, linked to sysbioverse.org. Markup:
 *
 * <div class="sv-ecosystem">
 *   <a href="https://sysbioverse.org/"><img src="assets/sysbioverse-logo.svg" alt="sysbioverse logo"></a>
 *   <p>... part of <a href="https://sysbioverse.org/">sysbioverse</a> ...</p>
 * </div>
 */
.md-typeset .sv-ecosystem {
  display: flex;
  align-items: center;
  gap: 1.2rem;
  margin: 2.5rem 0 1rem;
  padding: 1rem 1.25rem;
  border-top: 1px solid var(--md-default-fg-color--lightest);
  border-bottom: 1px solid var(--md-default-fg-color--lightest);
}

.md-typeset .sv-ecosystem img {
  width: 4.5rem;
  height: auto;
  flex: none;
}

.md-typeset .sv-ecosystem p {
  margin: 0;
  max-width: var(--sv-measure);
}

/* ---- Figures -------------------------------------------------------- */

/*
 * A figure with a caption. Markup (needs md_in_html):
 *
 * <figure class="sv-figure" markdown>
 * [![alt text](assets/figure.png)](assets/figure.pdf)
 * <figcaption>... <a href="assets/figure.pdf" download>PDF</a></figcaption>
 * </figure>
 */
.md-typeset .sv-figure {
  display: block;
  width: auto;
  max-width: none;
  margin: 1.5em 0;
}

.md-typeset .sv-figure > p {
  margin: 0;
}

.md-typeset .sv-figure img {
  width: 100%;
  height: auto;
}

.md-typeset .sv-figure figcaption {
  max-width: none;
  margin: 0;
  font-size: 0.85em;
  font-style: normal;
  text-align: left;
}

/* ---- Notebooks (mkdocs-jupyter) ------------------------------------- */

/* The text cells use the site font */
.md-content .jupyter-wrapper {
  --jp-content-font-family: var(--md-text-font-family);
  --jp-ui-font-family: var(--md-text-font-family);
}

/* No In [n] / Out [n] column: the cells use the full width */
.md-content .jupyter-wrapper .jp-Cell .jp-InputArea .jp-InputPrompt,
.md-content .jupyter-wrapper .jp-Cell .jp-OutputArea .jp-OutputPrompt {
  display: none;
}

/* Plots open at full size on click (docs-theme.js) */
.md-content .jupyter-wrapper .jp-RenderedImage img {
  cursor: zoom-in;
}

.sv-zoom {
  position: fixed;
  inset: 0;
  z-index: 10;
  display: flex;
  align-items: center;
  justify-content: center;
  padding: 2vmin;
  background: rgba(0, 0, 0, 0.8);
  cursor: zoom-out;
}

.sv-zoom img {
  max-width: 100%;
  max-height: 100%;
  object-fit: contain;
  background: #FFFFFF;
}